出版者:
Nieduszynski C.A. , Hiraga S. , Ak P. , Benham C.J. , Donaldson A.D
联系出版者:
Institute of Medical Science, University of Aberdeen, Foresterhill, Aberdeen AB25 2ZD, Scotland, UK
UC Davis Genome Center, University of California at Davis, One Shields Avenue, Davis, CA 95616, USA
keyword:
DNA replication origin sites
网站描述:
该数据库收录了已经确认和预测到的DNA复制起始位点.
description:
OriDB provides a web-based catalogue of confirmed and predicted DNA replication origin sites. At present this is limited to budding yeast (S. cerevisiae). Each proposed or confirmed origin site appears as a record in OriDB, with each record comprising seven pages. These pages provide, in text and graphical formats, the following information: genomic location and chromosome context of the origin site; time of origin replication; DNA sequence of proposed or experimentally confirmed origin elements; free energy required to open the DNA duplex (stress-induced DNA duplex destabilization or SIDD); and phylogenetic conservation of sequence elements. In addition, OriDB encourages community submission of additional information for each origin site through a User Notes facility. Origin sites are linked to several external resources, including the Saccharomyces Genome Database (SGD) and relevant publications at PubMed. Finally, a Chromosome Viewer utility allows users to interactively generate graphical representations of DNA replication data genome-wide.
加入时间:
2010-09-24 20:55:35
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